If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 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'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 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'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 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'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 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'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 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'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 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'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 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'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' 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'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 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'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 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'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 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'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 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'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 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'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 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'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 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'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' 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'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 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'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 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'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 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'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 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'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ), 'gf_id' => 'HOM05D000456', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000456' ), 'data_identifier' => 'HOM05D000456', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000456', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1152', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p01770' => 'bna', 'A02p40990' => 'bna', 'A02p41000' => 'bna', 'A02p41010' => 'bna', 'A03p03790' => 'bna', 'A04p16980' => 'bna', 'A06p34290' => 'bna', 'A06p34300' => 'bna', 'A06p34320' => 'bna', 'A06p34350' => 'bna', 'A08p25810' => 'bna', 'A09p01160' => 'bna', 'A09p06990' => 'bna', 'A09p57540' => 'bna', 'Aa31LG11G2800' => 'aar', 'Aa31LG3G14460' => 'aar', 'Aa31LG3G18220' => 'aar', 'Aa31LG5G1320' => 'aar', 'Aa31LG6G15110' => 'aar', 'Aa31LG7G14340' => 'aar', 'Aa31sc45G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.2409' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2416' => 'aag', 'Actinidia02658' => 'ach', 'Actinidia04347' => 'ach', 'Actinidia04348' => 'ach', 'Actinidia04349' => 'ach', 'Actinidia04351' => 'ach', 'Actinidia05867' => 'ach', 'Actinidia10362' => 'ach', 'Actinidia25359' => 'ach', 'Actinidia25360' => 'ach', 'Actinidia29608' => 'ach', 'Actinidia30805' => 'ach', 'Actinidia36239' => 'ach', 'Ah.01g012770' => 'amhyb', 'Ah.01g012800' => 'amhyb', 'Ah.01g012810' => 'amhyb', 'Ah.01g012820' => 'amhyb', 'Ah.02g118310' => 'amhyb', 'Ah.02g125850' => 'amhyb', 'Ah.03g135730' => 'amhyb', 'Ah.03g140260' => 'amhyb', 'Ah.03g141860' => 'amhyb', 'Ah.05g170580' => 'amhyb', 'Ah.06g186090' => 'amhyb', 'AL1G41740' => 'aly', 'AL4G11980' => 'aly', 'AL6G18790' => 'aly', 'AL6G23810' => 'aly', 'AL6G34610' => 'aly', 'AL6G34620' => 'aly', 'AL6G34630' => 'aly', 'AL6G51740' => 'aly', 'AL7G12460' => 'aly', 'Aqoxy3G01768' => 'aox', 'Aqoxy3G04311' => 'aox', 'Aqoxy58s001' => 'aox', 'Aqoxy5G01339' => 'aox', 'Aqoxy6G01469' => 'aox', 'Aqoxy6G01471' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B6IYK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4TVW2I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.51KF0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5BD9V0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5HY3IZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.82PDD7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8G10A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BD6PFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F60HC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GIYJ66' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GV9VS9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GYF88Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ISB7YF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LTSE8R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M887UV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MN65RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N85NDT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SIK5UM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SX57S8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T2XUYC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UCM1MC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WCFB28' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WN30HB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV68DF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEH3NP' => 'arhy', 'AT1G28200' => 'ath', 'AT2G22475' => 'ath', 'AT4G01600' => 'ath', 'AT4G40100' => 'ath', 'AT5G08350' => 'ath', 'AT5G13200' => 'ath', 'AT5G23350' => 'ath', 'AT5G23360' => 'ath', 'AT5G23370' => 'ath', 'ATR0022G008' => 'atr', 'ATR0582G174' => 'atr', 'ATR0618G389' => 'atr', 'ATR0796G027' => 'atr', 'Atru.chr11.1245' => 'acertr', 'Atru.chr11.1246' => 'acertr', 'Atru.chr11.1267' => 'acertr', 'Atru.chr11.1268' => 'acertr', 'Atru.chr11.2404' => 'acertr', 'Atru.chr13.1056' => 'acertr', 'Atru.chr3.1306' => 'acertr', 'Atru.chr4.940' => 'acertr', 'Atru.chr5.819' => 'acertr', 'Atru.chr6.2666' => 'acertr', 'AUR62003283' => 'cqu', 'AUR62005695' => 'cqu', 'AUR62016848' => 'cqu', 'AUR62017734' => 'cqu', 'AUR62017735' => 'cqu', 'AUR62017736' => 'cqu', 'AUR62019005' => 'cqu', 'AUR62027184' => 'cqu', 'AUR62027847' => 'cqu', 'AUR62028863' => 'cqu', 'AUR62032939' => 'cqu', 'AUR62032940' => 'cqu', 'AUR62032941' => 'cqu', 'AUR62032942' => 'cqu', 'AUR62037351' => 'cqu', 'AUR62042677' => 'cqu', 'BcaB01g02131' => 'bca', 'BcaB01g02132' => 'bca', 'BcaB03g12126' => 'bca', 'BcaB07g29859' => 'bca', 'BcaB08g35072' => 'bca', 'BcaB08g36151' => 'bca', 'BcaC01g00016' => 'bca', 'BcaC02g08651' => 'bca', 'BcaC02g08688' => 'bca', 'BcaC03g18026' => 'bca', 'BcaC03g18027' => 'bca', 'BcaC03g18028' => 'bca', 'BcaC04g23491' => 'bca', 'BcaC04g24083' => 'bca', 'BcaC07g41066' => 'bca', 'BcaNung01168' => 'bca', 'BcaNung01869' => 'bca', 'BcaNung03723' => 'bca', 'BcaNung03724' => 'bca', 'BcaNung03725' => 'bca', 'BcaNung05892' => 'bca', 'BolC2t06541H' => 'bol', 'BolC2t12140H' => 'bol', 'BolC2t12141H' => 'bol', 'BolC2t12142H' => 'bol', 'BolC3t12959H' => 'bol', 'BolC3t19732H' => 'bol', 'BolC4t26748H' => 'bol', 'BolC7t44942H' => 'bol', 'BolC7t44944H' => 'bol', 'BolC7t44945H' => 'bol', 'BolC7t44946H' => 'bol', 'BolC7t44947H' => 'bol', 'BolC8t51632H' => 'bol', 'BolC9t53058H' => 'bol', 'BolC9t53695H' => 'bol', 'BraA02t05153Z' => 'bra', 'BraA02t09047Z' => 'bra', 'BraA02t09048Z' => 'bra', 'BraA02t09049Z' => 'bra', 'BraA03t09726Z' => 'bra', 'BraA04t17328Z' => 'bra', 'BraA06t26361Z' => 'bra', 'BraA06t26362Z' => 'bra', 'BraA06t26363Z' => 'bra', 'BraA06t26365Z' => 'bra', 'BraA08t34536Z' => 'bra', 'BraA09t35786Z' => 'bra', 'BraA09t36347Z' => 'bra', 'BraA09t41145Z' => 'bra', 'C02p05980' => 'bna', 'C02p60880' => 'bna', 'C02p60890' => 'bna', 'C02p60900' => 'bna', 'C03p04270' => 'bna', 'C03p74830' => 'bna', 'C04p51680' => 'bna', 'C07p44180' => 'bna', 'C07p44200' => 'bna', 'C07p44210' => 'bna', 'C07p44220' => 'bna', 'C08p40660' => 'bna', 'C09p01240' => 'bna', 'C09p07790' => 'bna', 'CAN.G1058.43' => 'can', 'CAN.G1277.7' => 'can', 'CAN.G1388.5' => 'can', 'CAN.G274.17' => 'can', 'CAN.G274.18' => 'can', 'CAN.G274.19' => 'can', 'CAN.G274.20' => 'can', 'CAN.G274.21' => 'can', 'CAN.G274.22' => 'can', 'CAN.G274.24' => 'can', 'CAN.G274.31' => 'can', 'CAN.G458.25' => 'can', 'CAN.G525.44' => 'can', 'CAN.G929.16' => 'can', 'CANSAT01G1125' => 'cansat', 'CANSAT01G3014' => 'cansat', 'CANSAT25G0888' => 'cansat', 'CANSAT56G0623' => 'cansat', 'CANSAT78G0389' => 'cansat', 'CARHR027690' => 'chi', 'CARHR113670' => 'chi', 'CARHR190130' => 'chi', 'CARHR190140' => 'chi', 'CARHR190180' => 'chi', 'CARHR190190' => 'chi', 'CARHR200270' => 'chi', 'CARHR204720' => 'chi', 'CARHR250070' => 'chi', 'Carub.0001s2664' => 'cru', 'Carub.0006s0725' => 'cru', 'Carub.0006s1137' => 'cru', 'Carub.0006s2113' => 'cru', 'Carub.0006s2114' => 'cru', 'Carub.0006s2115' => 'cru', 'Carub.0006s3559' => 'cru', 'Carub.0007s0209' => 'cru', 'Ca_03981_v3' => 'car', 'Ca_08117_v3' => 'car', 'Ca_11264_v3' => 'car', 'Ca_11265_v3' => 'car', 'Ca_11266_v3' => 'car', 'Ca_11267_v3' => 'car', 'Ca_17446_v3' => 'car', 'Ca_22590_v3' => 'car', 'Ca_25360_v3' => 'car', 'Ca_30021_v3' => 'car', 'CBR_g66773' => 'cbr', 'Cc00_g01920' => 'ccan', 'Cc00_g12050' => 'ccan', 'Cc00_g20830' => 'ccan', 'Cc00_g22290' => 'ccan', 'Cc04_g08430' => 'ccan', 'Cc05_g01840' => 'ccan', 'Cc05_g01850' => 'ccan', 'Cc05_g01880' => 'ccan', 'Cc07_g14360' => 'ccan', 'Cc10_g15530' => 'ccan', 'CDE03G0438' => 'cde', 'CDE04G2548' => 'cde', 'CDE06G2165' => 'cde', 'CDE06G2357' => 'cde', 'CDE07G0748' => 'cde', 'CDE10G0613' => 'cde', 'CDE10G1064' => 'cde', 'Cfa004360' => 'cfa', 'Cfa007183' => 'cfa', 'Cfa007343' => 'cfa', 'Cfa008779' => 'cfa', 'Cfa013706' => 'cfa', 'Cfa017802' => 'cfa', 'Cfa018654' => 'cfa', 'Cfa018655' => 'cfa', 'Cfa019568' => 'cfa', 'Ciclev10002139m.g' => 'ccl', 'Ciclev10016142m.g' => 'ccl', 'Ciclev10022077m.g' => 'ccl', 'Ciclev10022186m.g' => 'ccl', 'Ciclev10023921m.g' => 'ccl', 'Ciclev10026092m.g' => 'ccl', 'Ciclev10032479m.g' => 'ccl', 'Ciclev10032699m.g' => 'ccl', 'Ciclev10032805m.g' => 'ccl', 'Ciclev10033826m.g' => 'ccl', 'CiPaw.01G047600' => 'cil', 'CiPaw.01G068300' => 'cil', 'CiPaw.02G021900' => 'cil', 'CiPaw.03G003500' => 'cil', 'CiPaw.05G103800' => 'cil', 'CiPaw.05G172400' => 'cil', 'CiPaw.07G168800' => 'cil', 'CiPaw.08G053700' => 'cil', 'CiPaw.11G160600' => 'cil', 'CiPaw.15G001800' => 'cil', 'CiPaw.15G001900' => 'cil', 'CiPaw.16G002100' => 'cil', 'CiPaw.16G074600' => 'cil', 'CiPaw.16G074700' => 'cil', 'ClCG00G002080' => 'cla', 'ClCG01G008060' => 'cla', 'ClCG01G008070' => 'cla', 'ClCG01G014770' => 'cla', 'ClCG01G018500' => 'cla', 'ClCG02G014170' => 'cla', 'ClCG02G014180' => 'cla', 'ClCG02G014190' => 'cla', 'ClCG07G002180' => 'cla', 'ClCG07G002190' => 'cla', 'ClCG07G015050' => 'cla', 'ClCG08G011460' => 'cla', 'COL.COLO4_11956' => 'col', 'COL.COLO4_13338' => 'col', 'COL.COLO4_27334' => 'col', 'COL.COLO4_33113' => 'col', 'Cpa.g.c39954' => 'cpa', 'Cpa.g.sc138.1' => 'cpa', 'Cpa.g.sc138.2' => 'cpa', 'Cpa.g.sc36.205' => 'cpa', 'Cpa.g.sc55.55' => 'cpa', 'Cpa.g.sc57.56' => 'cpa', 'Cpa.g.sc60.95' => 'cpa', 'Cpa.g.sc60.96' => 'cpa', 'Cpa.g.sc70.90' => 'cpa', 'CsaV3_1G007560' => 'csa', 'CsaV3_2G030050' => 'csa', 'CsaV3_3G030140' => 'csa', 'CsaV3_3G030150' => 'csa', 'CsaV3_4G002600' => 'csa', 'CsaV3_5G020760' => 'csa', 'CsaV3_5G020770' => 'csa', 'CsaV3_5G029030' => 'csa', 'CsaV3_5G029040' => 'csa', 'CsaV3_5G029050' => 'csa', 'CsaV3_5G029060' => 'csa', 'CsaV3_5G029070' => 'csa', 'CsaV3_6G043010' => 'csa', 'CsaV3_6G043020' => 'csa', 'CsaV3_6G045150' => 'csa', 'CSS0001240' => 'camsi', 'CSS0001404' => 'camsi', 'CSS0002969' => 'camsi', 'CSS0011329' => 'camsi', 'CSS0011458' => 'camsi', 'CSS0012920' => 'camsi', 'CSS0016198' => 'camsi', 'CSS0017246' => 'camsi', 'CSS0018815' => 'camsi', 'CSS0019234' => 'camsi', 'CSS0021076' => 'camsi', 'CSS0028678' => 'camsi', 'CSS0029010' => 'camsi', 'CSS0040490' => 'camsi', 'CSS0043439' => 'camsi', 'CSS0043528' => 'camsi', 'CSS0043553' => 'camsi', 'CSS0044314' => 'camsi', 'CSS0045518' => 'camsi', 'CSS0046992' => 'camsi', 'CSS0050075' => 'camsi', 'DCAR_003456' => 'dca', 'DCAR_014194' => 'dca', 'DCAR_014195' => 'dca', 'DCAR_019292' => 'dca', 'DCAR_030354' => 'dca', 'Dinv06403' => 'din', 'Dinv07499' => 'din', 'Dinv11731' => 'din', 'Dinv13629' => 'din', 'Dinv17649' => 'din', 'Dinv17650' => 'din', 'Dinv20784' => 'din', 'Dinv33295' => 'din', 'Dinv42642' => 'din', 'Dinv44832' => 'din', 'Duzib052G0498' => 'dzi', 'Duzib052G0870' => 'dzi', 'Duzib093G0461' => 'dzi', 'Duzib116G0611' => 'dzi', 'Duzib132G0749' => 'dzi', 'Duzib138G1236' => 'dzi', 'Duzib147G1594' => 'dzi', 'Duzib205G0311' => 'dzi', 'Duzib248G0549' => 'dzi', 'Duzib264G0355' => 'dzi', 'Duzib264G1196' => 'dzi', 'ECA232G4902' => 'eca', 'ECA240G2820' => 'eca', 'ECA246G0495' => 'eca', 'ECA246G1351' => 'eca', 'ECA246G3359' => 'eca', 'ECA246G3627' => 'eca', 'ECA246G4163' => 'eca', 'ECA246G5212' => 'eca', 'ECA246G5219' => 'eca', 'ECA247G2470' => 'eca', 'EL10Ac1g00470' => 'bvu', 'EL10Ac1g00471' => 'bvu', 'EL10Ac1g01099' => 'bvu', 'EL10Ac6g13585' => 'bvu', 'EL10Ac6g14797' => 'bvu', 'EL10Ac9g20689' => 'bvu', 'EL10Ac9g22985' => 'bvu', 'EL10Ac9g22986' => 'bvu', 'EL10Ac9g22988' => 'bvu', 'Eucgr.B00570' => 'egr', 'Eucgr.C01907' => 'egr', 'Eucgr.C01910' => 'egr', 'Eucgr.C01931' => 'egr', 'Eucgr.F00402' => 'egr', 'Eucgr.F02124' => 'egr', 'Eucgr.G02590' => 'egr', 'Eucgr.H00655' => 'egr', 'Eucgr.H03375' => 'egr', 'Eucgr.H03379' => 'egr', 'Eucgr.I01610' => 'egr', 'Eucgr.J00353' => 'egr', 'Eucgr.J00355' => 'egr', 'Eucgr.J00356' => 'egr', 'Eucgr.J00357' => 'egr', 'Eucgr.K00540' => 'egr', 'Eucgr.K00543' => 'egr', 'Eucgr.K00544' => 'egr', 'Eucgr.K00764' => 'egr', 'Eucgr.K02322' => 'egr', 'Eucgr.L00860' => 'egr', 'Eucgr.L03124' => 'egr', 'FAN02G1172' => 'fan', 'FAN04G0162' => 'fan', 'FAN04G1762' => 'fan', 'FAN04G3117' => 'fan', 'FAN05G4639' => 'fan', 'FAN07G0385' => 'fan', 'FAN07G1675' => 'fan', 'FAN07G2234' => 'fan', 'FAN08G1845' => 'fan', 'FAN09G0487' => 'fan', 'FAN12G0786' => 'fan', 'FAN12G1120' => 'fan', 'FAN12G1783' => 'fan', 'FAN13G0904' => 'fan', 'FAN13G1134' => 'fan', 'FAN13G2284' => 'fan', 'FAN14G4758' => 'fan', 'FAN15G2398' => 'fan', 'FAN17G0019' => 'fan', 'FAN17G0120' => 'fan', 'FAN18G3903' => 'fan', 'FAN18G4036' => 'fan', 'FAN22G2119' => 'fan', 'FAN23G0244' => 'fan', 'FAN24G3271' => 'fan', 'FAN26G0821' => 'fan', 'FAN27G3282' => 'fan', 'FAN28G1535' => 'fan', 'FvH4_1g20050' => 'fve', 'FvH4_2g18080' => 'fve', 'FvH4_4g23040' => 'fve', 'FvH4_4g28530' => 'fve', 'FvH4_4g37190' => 'fve', 'FvH4_5g18490' => 'fve', 'FvH4_5g35910' => 'fve', 'FvH4_6g54120' => 'fve', 'Glyma.04G093400' => 'gma', 'Glyma.06G095300' => 'gma', 'Glyma.06G177300' => 'gma', 'Glyma.06G229400' => 'gma', 'Glyma.07G176400' => 'gma', 'Glyma.08G281400' => 'gma', 'Glyma.09G105800' => 'gma', 'Glyma.09G164100' => 'gma', 'Glyma.10G286800' => 'gma', 'Glyma.10G286900' => 'gma', 'Glyma.10G287100' => 'gma', 'Glyma.10G287200' => 'gma', 'Glyma.10G287300' => 'gma', 'Glyma.12G229600' => 'gma', 'Glyma.13G270000' => 'gma', 'Glyma.16G050700' => 'gma', 'Glyma.16G212600' => 'gma', 'Glyma.18G145300' => 'gma', 'Glyma.18G250300' => 'gma', 'Glyma.19G100000' => 'gma', 'Glyma.20G011100' => 'gma', 'Glyma.20G011200' => 'gma', 'Glyma.20G101800' => 'gma', 'Glyma.20G102000' => 'gma', 'Glyma.20G102100' => 'gma', 'Glyma.20G102200' => 'gma', 'Glyma.20G102300' => 'gma', 'Gohir.A01G021100' => 'ghi', 'Gohir.A02G077200' => 'ghi', 'Gohir.A02G130700' => 'ghi', 'Gohir.A03G151300' => 'ghi', 'Gohir.A03G166201' => 'ghi', 'Gohir.A03G166300' => 'ghi', 'Gohir.A03G166500' => 'ghi', 'Gohir.A03G166600' => 'ghi', 'Gohir.A03G166700' => 'ghi', 'Gohir.A03G166800' => 'ghi', 'Gohir.A03G166900' => 'ghi', 'Gohir.A05G221700' => 'ghi', 'Gohir.A07G230700' => 'ghi', 'Gohir.A10G087700' => 'ghi', 'Gohir.A11G050900' => 'ghi', 'Gohir.A11G103200' => 'ghi', 'Gohir.A11G205400' => 'ghi', 'Gohir.A12G074400' => 'ghi', 'Gohir.A12G132400' => 'ghi', 'Gohir.A13G062000' => 'ghi', 'Gohir.A13G062100' => 'ghi', 'Gohir.D01G019550' => 'ghi', 'Gohir.D02G084500' => 'ghi', 'Gohir.D02G174300' => 'ghi', 'Gohir.D02G189550' => 'ghi', 'Gohir.D02G189600' => 'ghi', 'Gohir.D02G189700' => 'ghi', 'Gohir.D02G189800' => 'ghi', 'Gohir.D02G189900' => 'ghi', 'Gohir.D02G190000' => 'ghi', 'Gohir.D03G041900' => 'ghi', 'Gohir.D05G224500' => 'ghi', 'Gohir.D07G238000' => 'ghi', 'Gohir.D10G100500' => 'ghi', 'Gohir.D11G054300' => 'ghi', 'Gohir.D11G107700' => 'ghi', 'Gohir.D11G217900' => 'ghi', 'Gohir.D12G081300' => 'ghi', 'Gohir.D12G136000' => 'ghi', 'Gohir.D13G059800' => 'ghi', 'Gohir.D13G059900' => 'ghi', 'Gohir.D13G059966' => 'ghi', 'Gohir.D13G060032' => 'ghi', 'Gorai.001G273800' => 'gra', 'Gorai.002G021900' => 'gra', 'Gorai.003G042500' => 'gra', 'Gorai.005G095200' => 'gra', 'Gorai.005G196000' => 'gra', 'Gorai.005G212300' => 'gra', 'Gorai.005G212400' => 'gra', 'Gorai.005G212500' => 'gra', 'Gorai.005G212600' => 'gra', 'Gorai.005G212700' => 'gra', 'Gorai.005G212800' => 'gra', 'Gorai.007G059400' => 'gra', 'Gorai.007G115400' => 'gra', 'Gorai.007G233900' => 'gra', 'Gorai.008G091900' => 'gra', 'Gorai.008G147200' => 'gra', 'Gorai.009G231900' => 'gra', 'Gorai.011G110200' => 'gra', 'Gorai.013G067700' => 'gra', 'Gorai.013G067800' => 'gra', 'Gorai.013G067900' => 'gra', 'Gorai.013G068200' => 'gra', 'GSVIVG01000958001' => 'vvi', 'GSVIVG01003615001' => 'vvi', 'GSVIVG01009127001' => 'vvi', 'GSVIVG01010252001' => 'vvi', 'GSVIVG01012919001' => 'vvi', 'GSVIVG01019134001' => 'vvi', 'GSVIVG01019136001' => 'vvi', 'GSVIVG01033015001' => 'vvi', 'GSVIVG01034391001' => 'vvi', 'GSVIVG01034396001' => 'vvi', 'GSVIVG01034399001' => 'vvi', 'GSVIVG01034407001' => 'vvi', 'GSVIVG01034410001' => 'vvi', 'GSVIVG01034412001' => 'vvi', 'GSVIVG01037829001' => 'vvi', 'HanXRQChr02g0047051' => 'han', 'HanXRQChr04g0099101' => 'han', 'HanXRQChr06g0171731' => 'han', 'HanXRQChr06g0171741' => 'han', 'HanXRQChr06g0171771' => 'han', 'HanXRQChr09g0242621' => 'han', 'HanXRQChr09g0249431' => 'han', 'HanXRQChr09g0250251' => 'han', 'HanXRQChr09g0271351' => 'han', 'HanXRQChr14g0444931' => 'han', 'HanXRQChr17g0540481' => 'han', 'HanXRQChr17g0541001' => 'han', 'HanXRQChr17g0541011' => 'han', 'HanXRQChr17g0541021' => 'han', 'HanXRQChr17g0541031' => 'han', 'HanXRQChr17g0541451' => 'han', 'HanXRQChr17g0541471' => 'han', 'HanXRQChr17g0550811' => 'han', 'Haze_09328' => 'cav', 'Haze_10610' => 'cav', 'Haze_11791' => 'cav', 'Haze_14927' => 'cav', 'Haze_15048' => 'cav', 'Haze_17413' => 'cav', 'Haze_18419' => 'cav', 'Haze_22350' => 'cav', 'Hma1.2p1_0010F.1_g007040' => 'hma', 'Hma1.2p1_0044F.1_g026330' => 'hma', 'Hma1.2p1_0044F.1_g026340' => 'hma', 'Hma1.2p1_0045F.1_g026440' => 'hma', 'Hma1.2p1_0125F.1_g059160' => 'hma', 'Hma1.2p1_0413F.1_g147460' => 'hma', 'Hma1.2p1_0413F.1_g147470' => 'hma', 'Hma1.2p1_0421F.1_g150020' => 'hma', 'Hma1.2p1_0459F.1_g157210' => 'hma', 'Hma1.2p1_0989F.1_g244850' => 'hma', 'Hma1.2p1_2702F.1_g327100' => 'hma', 'HPP92_001960' => 'vpl', 'HPP92_002422' => 'vpl', 'HPP92_003736' => 'vpl', 'HPP92_007363' => 'vpl', 'HPP92_008458' => 'vpl', 'HPP92_012869' => 'vpl', 'HPP92_012870' => 'vpl', 'HPP92_012871' => 'vpl', 'HPP92_012872' => 'vpl', 'HPP92_012882' => 'vpl', 'HPP92_012883' => 'vpl', 'HPP92_014759' => 'vpl', 'HPP92_014768' => 'vpl', 'HPP92_019298' => 'vpl', 'HPP92_023088' => 'vpl', 'HPP92_027237' => 'vpl', 'Hund08636' => 'sun', 'Hund08643' => 'sun', 'Hund08652' => 'sun', 'Hund08653' => 'sun', 'Hund08655' => 'sun', 'Hund08663' => 'sun', 'Hund08664' => 'sun', 'Hund08665' => 'sun', 'Hund08666' => 'sun', 'Hund14097' => 'sun', 'Hund16547' => 'sun', 'Hund16875' => 'sun', 'Hund27001' => 'sun', 'Hund28221' => 'sun', 'Hund28226' => 'sun', 'Lalb_Chr02g0143671' => 'lal', 'Lalb_Chr02g0143681' => 'lal', 'Lalb_Chr02g0144121' => 'lal', 'Lalb_Chr06g0163971' => 'lal', 'Lalb_Chr06g0163981' => 'lal', 'Lalb_Chr08g0242331' => 'lal', 'Lalb_Chr09g0326051' => 'lal', 'Lalb_Chr09g0332061' => 'lal', 'Lalb_Chr09g0334771' => 'lal', 'Lalb_Chr14g0363851' => 'lal', 'Lalb_Chr14g0370201' => 'lal', 'Lalb_Chr16g0381821' => 'lal', 'Lalb_Chr19g0133821' => 'lal', 'Lalb_Chr20g0109271' => 'lal', 'Lalb_Chr23g0270141' => 'lal', 'Lalb_Chr23g0270151' => 'lal', 'Lalb_Chr23g0270271' => 'lal', 'Lj1g0013032' => 'lja', 'Lj1g0018020' => 'lja', 'Lj1g0027239' => 'lja', 'Lj2A537T51' => 'lonja', 'Lj2g0011091' => 'lja', 'Lj2g0014182' => 'lja', 'Lj4A272G21' => 'lonja', 'Lj4A732G45' => 'lonja', 'Lj4g0013110' => 'lja', 'Lj4g0019223' => 'lja', 'Lj4P92T39' => 'lonja', 'Lj5A167G38' => 'lonja', 'Lj5g0002270' => 'lja', 'Lj6A707T51' => 'lonja', 'Lj6A708T56' => 'lonja', 'Lj6A708T58' => 'lonja', 'Lj6A708T59' => 'lonja', 'Lj6A708T60' => 'lonja', 'Lj6A713G65' => 'lonja', 'Lj6A713T68' => 'lonja', 'Lj6A713T69' => 'lonja', 'Lj6A713T70' => 'lonja', 'Lj6A713T72' => 'lonja', 'Lj6A713T74' => 'lonja', 'Lj6A835T37' => 'lonja', 'Lj6C707T10' => 'lonja', 'Lj6C708T3' => 'lonja', 'Lj6C713T10' => 'lonja', 'Lj6C713T9' => 'lonja', 'Lj7A615T36' => 'lonja', 'Lsat_1_v5_gn_0_19180' => 'lsa', 'Lsat_1_v5_gn_1_2361' => 'lsa', 'Lsat_1_v5_gn_2_65721' => 'lsa', 'Lsat_1_v5_gn_3_31500' => 'lsa', 'Lsat_1_v5_gn_3_34300' => 'lsa', 'Lsat_1_v5_gn_3_34361' => 'lsa', 'Lsat_1_v5_gn_3_34401' => 'lsa', 'Lsat_1_v5_gn_3_34421' => 'lsa', 'Lsat_1_v5_gn_3_34441' => 'lsa', 'Lsat_1_v5_gn_3_34461' => 'lsa', 'Lsat_1_v5_gn_7_66960' => 'lsa', 'Lsat_1_v5_gn_9_74261' => 'lsa', 'Manes.04G162500' => 'mes', 'Manes.04G162600' => 'mes', 'Manes.05G006200' => 'mes', 'Manes.08G103000' => 'mes', 'Manes.11G001400' => 'mes', 'Manes.11G078800' => 'mes', 'Manes.12G083216' => 'mes', 'Manes.12G128400' => 'mes', 'Manes.13G098200' => 'mes', 'Manes.15G117400' => 'mes', 'Manes.18G061700' => 'mes', 'Mapoly0051s0096' => 'mpo', 'MBI02_g18290_MAGBIO' => 'mbi', 'MBI06_g18791_MAGBIO' => 'mbi', 'MBI06_g27482_MAGBIO' => 'mbi', 'MBI11_g37082_MAGBIO' => 'mbi', 'MBI14_g31827_MAGBIO' => 'mbi', 'MBI17_g15409_MAGBIO' => 'mbi', 'MBI18_g38877_MAGBIO' => 'mbi', 'MD00G1067700' => 'mdo', 'MD00G1126700' => 'mdo', 'MD01G1174600' => 'mdo', 'MD02G1310900' => 'mdo', 'MD03G1074400' => 'mdo', 'MD03G1074700' => 'mdo', 'MD03G1075100' => 'mdo', 'MD03G1075400' => 'mdo', 'MD05G1071500' => 'mdo', 'MD05G1165500' => 'mdo', 'MD08G1192100' => 'mdo', 'MD09G1005200' => 'mdo', 'MD10G1065200' => 'mdo', 'MD10G1154900' => 'mdo', 'MD10G1155500' => 'mdo', 'MD11G1088600' => 'mdo', 'MD13G1002900' => 'mdo', 'MD14G1246200' => 'mdo', 'MD15G1316400' => 'mdo', 'MD15G1380800' => 'mdo', 'MD16G1127100' => 'mdo', 'MD17G1009200' => 'mdo', 'Medtr1g033750' => 'mtr', 'Medtr1g114640' => 'mtr', 'Medtr1g114680' => 'mtr', 'Medtr1g114690' => 'mtr', 'Medtr1g114750' => 'mtr', 'Medtr1g115130' => 'mtr', 'Medtr2g076350' => 'mtr', 'Medtr3g100750' => 'mtr', 'Medtr5g015750' => 'mtr', 'Medtr6g077990' => 'mtr', 'Medtr7g083570' => 'mtr', 'Medtr8g069110' => 'mtr', 'Medtr8g100065' => 'mtr', 'MELO3C000109.2' => 'cme', 'MELO3C002174.2' => 'cme', 'MELO3C005069.2' => 'cme', 'MELO3C005070.2' => 'cme', 'MELO3C007537.2' => 'cme', 'MELO3C007538.2' => 'cme', 'MELO3C007728.2' => 'cme', 'MELO3C011063.2' => 'cme', 'MELO3C011758.2' => 'cme', 'MELO3C017783.2' => 'cme', 'MELO3C022727.2' => 'cme', 'MELO3C022728.2' => 'cme', 'MELO3C027051.2' => 'cme', 'MELO3C027418.2' => 'cme', 'MELO3C034197.2' => 'cme', 'Migut.E00679' => 'egut', 'Migut.E00680' => 'egut', 'Migut.F00022' => 'egut', 'Migut.H02316' => 'egut', 'Migut.K01037' => 'egut', 'Migut.L00169' => 'egut', 'Migut.L00804' => 'egut', 'Migut.N02864' => 'egut', 'Migut.O00270' => 'egut', 'MSTRG.11559' => 'ama', 'MSTRG.13674' => 'ama', 'MSTRG.13676' => 'ama', 'MSTRG.15702' => 'ama', 'MSTRG.2070' => 'ama', 'MSTRG.2071' => 'ama', 'MSTRG.24433' => 'ama', 'MSTRG.2591' => 'ama', 'MSTRG.3050' => 'ama', 'MSTRG.3748' => 'ama', 'MSTRG.8042' => 'ama', 'Nitab4.5_0000054g0010' => 'nta', 'Nitab4.5_0000197g0050' => 'nta', 'Nitab4.5_0000585g0010' => 'nta', 'Nitab4.5_0000585g0020' => 'nta', 'Nitab4.5_0000585g0030' => 'nta', 'Nitab4.5_0000782g0010' => 'nta', 'Nitab4.5_0000902g0070' => 'nta', 'Nitab4.5_0001122g0180' => 'nta', 'Nitab4.5_0001600g0040' => 'nta', 'Nitab4.5_0001950g0060' => 'nta', 'Nitab4.5_0001950g0070' => 'nta', 'Nitab4.5_0003040g0080' => 'nta', 'Nitab4.5_0004812g0050' => 'nta', 'Nitab4.5_0004979g0130' => 'nta', 'Nitab4.5_0004979g0140' => 'nta', 'Nitab4.5_0005997g0010' => 'nta', 'Nitab4.5_0009598g0010' => 'nta', 'Nitab4.5_0010037g0020' => 'nta', 'Nitab4.5_0010037g0030' => 'nta', 'Nitab4.5_0022208g0010' => 'nta', 'Nn1g05492' => 'nnu', 'Nn3g18572' => 'nnu', 'Nn3g18612' => 'nnu', 'Nn4g22192' => 'nnu', 'Nn4g25093' => 'nnu', 'Nn4g25151' => 'nnu', 'Nn5g29949' => 'nnu', 'Oeu003279.1' => 'oeu', 'Oeu026887.2' => 'oeu', 'Oeu026889.1' => 'oeu', 'Oeu026890.1' => 'oeu', 'Oeu026891.1' => 'oeu', 'Oeu026893.1' => 'oeu', 'Oeu026894.1' => 'oeu', 'Oeu032374.1' => 'oeu', 'Oeu034427.1' => 'oeu', 'Oeu044842.1' => 'oeu', 'Oeu045586.1' => 'oeu', 'Oeu053573.1' => 'oeu', 'Oeu055133.1' => 'oeu', 'Oeu057290.1' => 'oeu', 'Oeu057517.1' => 'oeu', 'Oeu062406.1' => 'oeu', 'Oeu062412.2' => 'oeu', 'Oeu062414.1' => 'oeu', 'Oeu062418.1' => 'oeu', 'Oeu062420.1' => 'oeu', 'Oeu062424.1' => 'oeu', 'Oeu063716.1' => 'oeu', 'Os02g0636600' => 'osa', 'Os02g0636700' => 'osa', 'Os03g0187600' => 'osa', 'Os03g0736700' => 'osa', 'Os04g0526800' => 'osa', 'Os04g0527000' => 'osa', 'Os06g0218100' => 'osa', 'Os07g0621300' => 'osa', 'Os09g0466300' => 'osa', 'Os10g0489000' => 'osa', 'Peaxi162Scf00128g01750' => 'pax', 'Peaxi162Scf00171g00239' => 'pax', 'Peaxi162Scf00447g00091' => 'pax', 'Peaxi162Scf00569g00116' => 'pax', 'Peaxi162Scf00681g00037' => 'pax', 'Peaxi162Scf00681g00331' => 'pax', 'Peaxi162Scf00681g00332' => 'pax', 'Peaxi162Scf00681g00333' => 'pax', 'Peaxi162Scf00758g00412' => 'pax', 'Peaxi162Scf00818g00217' => 'pax', 'PGR031G2280' => 'pgr', 'PGR057G0004' => 'pgr', 'PGR083G2733' => 'pgr', 'PGR102G2489' => 'pgr', 'PGR119G1437' => 'pgr', 'PGR142G0320' => 'pgr', 'PGR142G0424' => 'pgr', 'PGR142G2134' => 'pgr', 'PGR142G2199' => 'pgr', 'PGR142G2624' => 'pgr', 'PGR142G2905' => 'pgr', 'PGR142G3414' => 'pgr', 'PGR142G3706' => 'pgr', 'PGSC0003DMG400004766' => 'stu', 'PGSC0003DMG400010173' => 'stu', 'PGSC0003DMG400011535' => 'stu', 'PGSC0003DMG400016209' => 'stu', 'PGSC0003DMG400023632' => 'stu', 'PGSC0003DMG400030011' => 'stu', 'Phvul.001G087100' => 'pvu', 'Phvul.003G013300' => 'pvu', 'Phvul.003G013400' => 'pvu', 'Phvul.003G289800' => 'pvu', 'Phvul.004G138600' => 'pvu', 'Phvul.005G065600' => 'pvu', 'Phvul.007G013700' => 'pvu', 'Phvul.007G013800' => 'pvu', 'Phvul.007G013900' => 'pvu', 'Phvul.007G014000' => 'pvu', 'Phvul.009G037800' => 'pvu', 'Phvul.011G162600' => 'pvu', 'Potri.001G323300' => 'ptr', 'Potri.002G102800' => 'ptr', 'Potri.002G184100' => 'ptr', 'Potri.003G165400' => 'ptr', 'Potri.003G165500' => 'ptr', 'Potri.003G165600' => 'ptr', 'Potri.003G165700' => 'ptr', 'Potri.004G068000' => 'ptr', 'Potri.004G068100' => 'ptr', 'Potri.004G068150' => 'ptr', 'Potri.004G068200' => 'ptr', 'Potri.005G088200' => 'ptr', 'Potri.005G088300' => 'ptr', 'Potri.005G088400' => 'ptr', 'Potri.005G088700' => 'ptr', 'Potri.005G159100' => 'ptr', 'Potri.007G075200' => 'ptr', 'Potri.007G075700' => 'ptr', 'Potri.014G109700' => 'ptr', 'Potri.017G152900' => 'ptr', 'Pp3c18_13230' => 'ppa', 'Pp3c22_5280' => 'ppa', 'Pp3c9_17450' => 'ppa', 'Prupe.1G218900' => 'ppe', 'Prupe.1G349500' => 'ppe', 'Prupe.1G527000' => 'ppe', 'Prupe.3G311600' => 'ppe', 'Prupe.5G244500' => 'ppe', 'Prupe.6G195900' => 'ppe', 'Prupe.8G193700' => 'ppe', 'Psat0s4570g0040' => 'psa', 'Psat0s616g0040' => 'psa', 'Psat0s911g0120' => 'psa', 'Psat1g122040' => 'psa', 'Psat4g116120' => 'psa', 'Psat5g045440' => 'psa', 'Psat6g234320' => 'psa', 'Psat6g234360' => 'psa', 'Psat6g234800' => 'psa', 'Psat6g234920' => 'psa', 'Psat6g234960' => 'psa', 'Psat7g022160' => 'psa', 'PSO017G0161' => 'pso', 'PSO063G0903' => 'pso', 'PSO063G1894' => 'pso', 'PSO063G3945' => 'pso', 'PSO063G7377' => 'pso', 'PSO170G6044' => 'pso', 'PSO210G5004' => 'pso', 'PSO478G3671' => 'pso', 'PSO541G0356' => 'pso', 'PSO675G0112' => 'pso', 'PSO782G1497' => 'pso', 'PSO782G2851' => 'pso', 'PSO782G5550' => 'pso', 'QL01p000861' => 'qlo', 'QL02p070073' => 'qlo', 'QL03p045331' => 'qlo', 'QL03p050279' => 'qlo', 'QL06p047612' => 'qlo', 'QL09p016983' => 'qlo', 'QL10p034207' => 'qlo', 'RcHm_v2.0_Chr2g0112041' => 'rch', 'RcHm_v2.0_Chr2g0176291' => 'rch', 'RcHm_v2.0_Chr4g0429311' => 'rch', 'RcHm_v2.0_Chr4g0436531' => 'rch', 'RcHm_v2.0_Chr4g0446971' => 'rch', 'RcHm_v2.0_Chr6g0283471' => 'rch', 'RcHm_v2.0_Chr6g0310061' => 'rch', 'RcHm_v2.0_Chr7g0177021' => 'rch', 'RcHm_v2.0_Chr7g0237641' => 'rch', 'Rhsim06G0074700' => 'rsi', 'Rhsim08G0014500' => 'rsi', 'Rhsim10G0002200' => 'rsi', 'Rhsim10G0171300' => 'rsi', 'Rhsim12G0089500' => 'rsi', 'Rhsim12G0089600' => 'rsi', 'Rhsim13G0097500' => 'rsi', 'RhsimUnG0103200' => 'rsi', 'Sabra02G0080700' => 'sbr', 'Sabra03G0120600' => 'sbr', 'Sabra03G0120700' => 'sbr', 'Sabra03G0120800' => 'sbr', 'Sabra03G0120900' => 'sbr', 'Sabra04G0045900' => 'sbr', 'Sabra04G0046000' => 'sbr', 'Sabra05G0072700' => 'sbr', 'Sabra05G0072800' => 'sbr', 'Sabra05G0073000' => 'sbr', 'Sabra05G0073300' => 'sbr', 'Sabra05G0121100' => 'sbr', 'Sabra07G0064100' => 'sbr', 'Sabra14G0081000' => 'sbr', 'Sabra16G0008400' => 'sbr', 'Sabra16G0205200' => 'sbr', 'SalBow2G1080' => 'sbo', 'SalBow2G1670' => 'sbo', 'SalBow3G2443' => 'sbo', 'SalBow4G2802' => 'sbo', 'SalBow5G1162' => 'sbo', 'SalBow8G2017' => 'sbo', 'Sc03g0000220' => 'sci', 'Sc03g0000250' => 'sci', 'Sc04g0010470' => 'sci', 'Sc06g0007590' => 'sci', 'Sc06g0007600' => 'sci', 'Sc06g0007610' => 'sci', 'Sc06g0007620' => 'sci', 'Sc06g0007630' => 'sci', 'Sc06g0007640' => 'sci', 'Sc06g0007650' => 'sci', 'Sc06g0007660' => 'sci', 'Sc12g0002840' => 'sci', 'Sc23g0000550' => 'sci', 'Sed0003946' => 'sed', 'Sed0006640' => 'sed', 'Sed0007867' => 'sed', 'Sed0008363' => 'sed', 'Sed0008696' => 'sed', 'Sed0010130' => 'sed', 'Sed0012243' => 'sed', 'Sed0013010' => 'sed', 'Sed0013831' => 'sed', 'Sed0015528' => 'sed', 'Sed0017848' => 'sed', 'Sed0018858' => 'sed', 'Sed0019084' => 'sed', 'Sed0020203' => 'sed', 'Sed0023813' => 'sed', 'Sed0023869' => 'sed', 'Sed0023911' => 'sed', 'SEGI_25016' => 'sgi', 'SEGI_26821' => 'sgi', 'SEGI_29235' => 'sgi', 'SGA_v2.0_scaffold103G30041' => 'sas', 'SGA_v2.0_scaffold44G16944' => 'sas', 'SGA_v2.0_scaffold45G17261' => 'sas', 'SGA_v2.0_scaffold90G27742' => 'sas', 'SHI21912' => 'shi', 'SMO347G0193' => 'smo', 'Solyc01g009760.3' => 'sly', 'Solyc03g098660.3' => 'sly', 'Solyc04g008930.2' => 'sly', 'Solyc04g008940.4' => 'sly', 'Solyc04g008950.4' => 'sly', 'Solyc04g008960.3' => 'sly', 'Solyc04g008970.3' => 'sly', 'Solyc04g014250.3' => 'sly', 'Solyc07g021540.3' => 'sly', 'Solyc08g078510.3' => 'sly', 'Solyc11g010440.3' => 'sly', 'Solyc11g011580.2' => 'sly', 'Solyc11g011590.2' => 'sly', 'Solyc11g011600.3' => 'sly', 'Sopen01g005300' => 'spe', 'Sopen03g029370' => 'spe', 'Sopen04g004120' => 'spe', 'Sopen04g004130' => 'spe', 'Sopen04g004140' => 'spe', 'Sopen04g004150' => 'spe', 'Sopen04g006360' => 'spe', 'Sopen07g010950' => 'spe', 'Sopen08g026990' => 'spe', 'Sopen11g005220' => 'spe', 'Sp1g24390' => 'spa', 'Sp2g23800' => 'spa', 'Sp2g23810' => 'spa', 'Sp4g01490' => 'spa', 'Sp6g01510' => 'spa', 'Sp6g30780' => 'spa', 'Sp6g34590' => 'spa', 'TAR371G0901' => 'tar', 'TAR376G0600' => 'tar', 'TAR381G0793' => 'tar', 'TAR582G0001' => 'tar', 'TAR622G1168' => 'tar', 'TAR625G1299' => 'tar', 'TAR628G0183' => 'tar', 'TAR636G2679' => 'tar', 'THA.LOC104800750' => 'tha', 'THA.LOC104807675' => 'tha', 'THA.LOC104812608' => 'tha', 'THA.LOC104818380' => 'tha', 'THA.LOC104819370' => 'tha', 'THA.LOC104824905' => 'tha', 'THA.LOC104825474' => 'tha', 'THA.LOC104825919' => 'tha', 'Thecc.01G093100' => 'tca', 'Thecc.01G328800' => 'tca', 'Thecc.02G154300' => 'tca', 'Thecc.02G196100' => 'tca', 'Thecc.03G151600' => 'tca', 'Thecc.04G044400' => 'tca', 'Thecc.08G067000' => 'tca', 'Thhalv10000257m.g' => 'esa', 'Thhalv10004897m.g' => 'esa', 'Thhalv10004905m.g' => 'esa', 'Thhalv10008557m.g' => 'esa', 'Thhalv10014053m.g' => 'esa', 'Thhalv10014408m.g' => 'esa', 'Thhalv10025890m.g' => 'esa', 'Thhalv10028933m.g' => 'esa', 'TPR.G13947' => 'tpr', 'TPR.G14200' => 'tpr', 'TPR.G17743' => 'tpr', 'TPR.G25539' => 'tpr', 'TPR.G26033' => 'tpr', 'TPR.G27455' => 'tpr', 'TPR.G33018' => 'tpr', 'TPR.G4029' => 'tpr', 'TPR.G4042' => 'tpr', 'TPR.G4050' => 'tpr', 'TPR.G4079' => 'tpr', 'TPR.G40861' => 'tpr', 'TPR.G4090' => 'tpr', 'TPR.G5773' => 'tpr', 'TPR.G7384' => 'tpr', 'TWI12G0036' => 'twi', 'TWI23G0730' => 'twi', 'TWI36G0735' => 'twi', 'TWI53G0043' => 'twi', 'TWI53G0958' => 'twi', 'TWI56G1096' => 'twi', 'TWI59G1301' => 'twi', 'TWI74G0528' => 'twi', 'TWI74G1450' => 'twi', 'TWI74G1619' => 'twi', 'TWI74G1683' => 'twi', 'TWI77G0186' => 'twi', 'TWI77G0367' => 'twi', 'unitig_22.g5620' => 'ugi', 'unitig_52.g17305' => 'ugi', 'unitig_699.g19636' => 'ugi', 'unitig_744.g24108' => 'ugi', 'unitig_747.g21114' => 'ugi', 'unitig_748.g7083' => 'ugi', 'unitig_749.g13326' => 'ugi', 'unitig_749.g14322' => 'ugi', 'vmacro15998' => 'vma', 'vmacro15999' => 'vma', 'vmacro16000' => 'vma', 'vmacro16001' => 'vma', 'vmacro16081' => 'vma', 'vmacro16082' => 'vma', 'vmacro17740' => 'vma', 'vmacro18572' => 'vma', 'vmacro22081' => 'vma', 'vmacro22236' => 'vma', 'vmacro22334' => 'vma', 'VMungo0251G3184' => 'vmu', 'VMungo0464G0285' => 'vmu', 'VMungo0464G1691' => 'vmu', 'VMungo0720G0808' => 'vmu', 'VMungo0720G1631' => 'vmu', 'VMungo0720G1703' => 'vmu', 'VMungo0720G2858' => 'vmu', 'VMungo1080G0695' => 'vmu', 'VMungo1127G0806' => 'vmu', 'VMungo1215G0258' => 'vmu', 'VMungo1215G2024' => 'vmu', 'VMungo1309G1361' => 'vmu', 'VMungo1383G0245' => 'vmu', 'Zm00001eb006620' => 'zma', 'Zm00001eb045240' => 'zma', 'Zm00001eb076740' => 'zma', 'Zm00001eb076750' => 'zma', 'Zm00001eb088990' => 'zma', 'Zm00001eb095600' => 'zma', 'Zm00001eb109570' => 'zma', 'Zm00001eb185580' => 'zma', 'Zm00001eb185590' => 'zma', 'Zm00001eb215380' => 'zma', 'Zm00001eb220990' => 'zma', 'Zm00001eb231580' => 'zma', 'Zm00001eb248300' => 'zma', 'Zm00001eb279260' => 'zma', 'Zm00001eb372900' => 'zma', 'Zm00001eb408850' => 'zma', 'Zm00001eb427040' => 'zma' ) $gf_id = 'HOM05D000456' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000456' ) $data_identifier = 'HOM05D000456' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 28, 'aar' => (int) 7, 'aag' => (int) 2, 'ach' => (int) 12, 'amhyb' => (int) 11, 'aly' => (int) 9, 'aox' => (int) 6, 'arhy' => (int) 25, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 21, 'bol' => (int) 15, 'bra' => (int) 14, 'can' => (int) 14, 'cansat' => (int) 5, 'chi' => (int) 9, 'cru' => (int) 8, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 7, 'cfa' => (int) 9, 'ccl' => (int) 10, 'cil' => (int) 14, 'cla' => (int) 12, 'col' => (int) 4, 'cpa' => (int) 9, 'csa' => (int) 15, 'camsi' => (int) 21, 'dca' => (int) 5, 'din' => (int) 10, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 9, 'egr' => (int) 22, 'fan' => (int) 28, 'fve' => (int) 8, 'gma' => (int) 27, 'ghi' => (int) 43, 'gra' => (int) 22, 'vvi' => (int) 15, 'han' => (int) 18, 'cav' => (int) 8, 'hma' => (int) 11, 'vpl' => (int) 16, 'sun' => (int) 15, 'lal' => (int) 17, 'lja' => (int) 8, 'lonja' => (int) 22, 'lsa' => (int) 12, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 7, 'mdo' => (int) 22, 'mtr' => (int) 13, 'cme' => (int) 15, 'egut' => (int) 9, 'ama' => (int) 11, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 22, 'osa' => (int) 10, 'pax' => (int) 10, 'pgr' => (int) 13, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 20, 'ppa' => (int) 3, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 13, 'qlo' => (int) 7, 'rch' => (int) 9, 'rsi' => (int) 8, 'sbr' => (int) 16, 'sbo' => (int) 6, 'sci' => (int) 13, 'sed' => (int) 17, 'sgi' => (int) 3, 'sas' => (int) 4, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 14, 'spe' => (int) 10, 'spa' => (int) 7, 'tar' => (int) 8, 'tha' => (int) 8, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 15, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 11, 'vmu' => (int) 13, 'zma' => (int) 17 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb427040' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1